UHGP-MC 3383

Information

Number of sequences (UHGP-50):
73
Average sequence length:
51±6 aa
Average transmembrane regions:
0
Low complexity (%):
0
Coiled coils (%):
1.41
Disordered domains (%):
0.35
Pfam dominant architecture:
PF13420
Pfam % dominant architecture:
548
Pfam overlap:
0.27
Pfam overlap type:
reduced

Downloads

Seeds:
MC3383.fasta
Seeds (0.60 cdhit):
MC3383_cdhit.fasta
MSA:
MC3383_msa.fasta
HMM model:
MC3383.hmm

Sequences list (filtered 60 P.I.)

Protein Range AA
GUT_GENOME105439_0112311-50FHFLIFSMKVPKTFGREINYLRSPMTKQCIKILIKANPMN
GUT_GENOME248205_0030824-76KISYESKLYELISASLEFSCNARNGVTRIASYLKNPMTQQCIKILMKADSMNE
GUT_GENOME230251_0092041-84LPGALIKSLSEFILGFLCNARNNPTRSGCSARFKACNTILNHAK
GUT_GENOME157911_0156295-137WQVVKKIRIQSLSALALVFSCNARRVMTKHGMKTHAKSDSAIL
GUT_GENOME161935_00387125-183IFREALIKSLSDFILEFLCNARNGGNANSELFKELHDEAVHKNSYKSRLCELISASLEP
GUT_GENOME181194_0020836-91AQPRDLSRETLIQSLSDFTLESLCIARNNLTRIASYLRKGMTKLCIKILVKSDSAI
GUT_GENOME152005_0041314-70MATTRAAKKEALIYSLSAFHSCIFTQYKEWDDANSELFKESHDAVLRKNTYEIRLYE
GUT_GENOME254611_00255217-270SHCLTREALIKSLSDFILAFLFNARNKSTRIASYLRRLMTQHWIKIHMKFDSAN
GUT_GENOME153872_0028839-90RQALKEALIKSLFAFILEFLCNVRNGLTRIAGYLRRPMTKQCIKILIKGNSM
GUT_GENOME270880_0001432-81VKEALIKSLFAFTLGFFMQSKEWDSLNSKLFKESHDEAVHKNPSKSKLYE
GUT_GENOME263739_0032540-111RSRPGEALIKSLSDFILGFLCNARNNSTQIASYLRQQSCIGLLSQDKLIGLPFILGRAMTKQCIKILMKSDS